SNPper - IIPGA PrettyBase Importer Goldenpath: hg16
dbSNP: build 118
Login: pgabot
Home Directory Preferences Feedback Logout
 
Prettybase importer
Gene: IL23A Region searched: chr12:55008930-55030460
Match orientation: Forward Processing time: 0.29 seconds
Total SNPs: 7 Correct: 7

Imported SNPs
Position in
refseq
Absolute
position
Relative
positions
AA
change
All 1 All 2 All 3 All 4 Minor allele
frequency
Base in
refseq
Known base
(from GoldenPath)
Known SNP
(from dbSNP)
Assigned name
3955 chr12:55017883 -1213 A   A (93) X (1)     1% A A IIPGA-IL23A-3955 IIPGA-IL23A-3955
4003 chr12:55017931 -1165 A/G   G (93) A (1)     1% G G IIPGA-IL23A-4003 IIPGA-IL23A-4003
4254 chr12:55018182 -914 C/T   C (91) T (3)     3% C C IIPGA-IL23A-4254 IIPGA-IL23A-4254
5133 chr12:55019061 -35 A/G   G (91) A (1)     1% G G IIPGA-IL23A-5133 IIPGA-IL23A-5133
5358 chr12:55019286 190 G/T   G (91) T (1)     1% G G IIPGA-IL23A-5358 IIPGA-IL23A-5358
5552 chr12:55019480 384 C/T 56 L/L C (90) T (2)     2% C C IIPGA-IL23A-5552 IIPGA-IL23A-5552
5870 chr12:55019798 702 A/G 106 S/S G (93) A (1)     1% G G IIPGA-IL23A-5870 IIPGA-IL23A-5870
© 2001-2004, Alberto Riva, CHIP