 |
SNPper - IIPGA PrettyBase Importer |
Goldenpath: hg16
dbSNP: build 118
Login: pgabot |
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| Imported SNPs |
Position in
refseq |
Absolute
position |
Relative
positions |
AA
change |
All 1 |
All 2 |
All 3 |
All 4 |
Minor allele
frequency |
Base in
refseq |
Known base
(from GoldenPath) |
Known SNP
(from dbSNP) |
Assigned name |
| 3603 |
chr13:19074083 |
-2058 A/G |
|
A (93) |
G (1) |
|
|
1% |
A |
A |
|
IIPGA-IL17D-3603 |
| 3972 |
chr13:19074452 |
-1689 G/T |
|
G (91) |
T (3) |
|
|
3% |
G |
G |
|
IIPGA-IL17D-3972 |
| 4253 |
chr13:19074733 |
-1408 C/T |
|
T (93) |
C (1) |
|
|
1% |
T |
T |
|
IIPGA-IL17D-4253 |
| 5094 |
chr13:19075574 |
-567 A/G |
|
G (61) |
A (33) |
|
|
35% |
G |
G |
|
IIPGA-IL17D-5094 |
| 6575 |
chr13:19077055 |
914 A/G |
|
G (81) |
A (7) |
|
|
7% |
G |
G |
|
IIPGA-IL17D-6575 |
| 6980 |
chr13:19077460 |
1319 G/T |
|
G (91) |
T (3) |
|
|
3% |
G |
G |
|
IIPGA-IL17D-6980 |
| 6995 |
chr13:19077475 |
1334 A/G |
|
G (85) |
A (9) |
|
|
10% |
G |
G |
|
IIPGA-IL17D-6995 |
| 7210 |
chr13:19077690 |
1549 A/G |
|
G (61) |
A (33) |
|
|
35% |
G |
G |
rs1075690 |
IIPGA-IL17D-7210 |
| 7449 |
chr13:19077929 |
1788 G/T |
|
T (93) |
G (1) |
|
|
1% |
T |
T |
|
IIPGA-IL17D-7449 |
| 7554 |
chr13:19078034 |
1893 A/G |
|
G (57) |
A (35) |
|
|
37% |
A |
A |
rs735539 |
IIPGA-IL17D-7554 |
| 7883 |
chr13:19078363 |
2222 A/G |
|
G (59) |
A (35) |
|
|
37% |
A |
A |
rs2290143 |
IIPGA-IL17D-7883 |
| 7930 |
chr13:19078410 |
2269 C/T |
|
C (59) |
T (35) |
|
|
37% |
T |
T |
|
IIPGA-IL17D-7930 |
| 8258 |
chr13:19078738 |
2597 A/T |
|
T (67) |
A (25) |
|
|
27% |
A |
A |
rs7985552 |
IIPGA-IL17D-8258 |
| 9242 |
chr13:19079722 |
3581 C/T |
|
C (83) |
T (5) |
|
|
5% |
C |
C |
|
IIPGA-IL17D-9242 |
| 9353 |
chr13:19079833 |
3692 G/T |
|
T (91) |
G (1) |
|
|
1% |
T |
T |
|
IIPGA-IL17D-9353 |
| 9705 |
chr13:19080185 |
4044 G/T |
|
T (56) |
G (34) |
|
|
36% |
G |
G |
|
IIPGA-IL17D-9705 |
| 9792 |
chr13:19080272 |
4131 A/G |
|
A (59) |
G (33) |
|
|
35% |
G |
G |
|
IIPGA-IL17D-9792 |
| 10244 |
chr13:19080724 |
4583 C/T |
|
T (57) |
C (33) |
|
|
35% |
C |
C |
|
IIPGA-IL17D-10244 |
| 12616 |
chr13:19083096 |
6955 C/G |
|
G (57) |
C (35) |
|
|
37% |
C |
C |
rs6490606 |
IIPGA-IL17D-12616 |
| 12677 |
chr13:19083157 |
7016 A/C |
|
A (91) |
C (1) |
|
|
1% |
A |
A |
|
IIPGA-IL17D-12677 |
| 12688 |
chr13:19083168 |
7027 A/C |
|
C (64) |
A (28) |
|
|
30% |
C |
C |
|
IIPGA-IL17D-12688 |
| 12689 |
chr13:19083169 |
7028 C/T |
|
C (57) |
T (35) |
|
|
37% |
T |
T |
rs6490607 |
IIPGA-IL17D-12689 |
| 12705 |
chr13:19083185 |
7044 C/T |
|
C (56) |
T (36) |
|
|
38% |
T |
T |
rs6490608 |
IIPGA-IL17D-12705 |
| 13488 |
chr13:19083968 |
7827 |
|
X (92) |
|
|
|
|
G |
G |
|
IIPGA-IL17D-13488 |
| 13517 |
chr13:19083997 |
7856 A/C |
|
C (87) |
A (5) |
|
|
5% |
C |
C |
|
IIPGA-IL17D-13517 |
| 13795 |
chr13:19084275 |
8134 A/G |
|
A (79) |
G (1) |
|
|
1% |
A |
A |
|
IIPGA-IL17D-13795 |
| 15530 |
chr13:19086010 |
9869 G/T |
|
G (87) |
T (5) |
|
|
5% |
G |
G |
|
IIPGA-IL17D-15530 |
| 15618 |
chr13:19086098 |
9957 C/G |
|
C (91) |
G (1) |
|
|
1% |
C |
C |
|
IIPGA-IL17D-15618 |
| 15695 |
chr13:19086175 |
10034 C/T |
|
C (88) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-IL17D-15695 |
| 15731 |
chr13:19086211 |
10070 A/G |
|
G (88) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-IL17D-15731 |
| 15748 |
chr13:19086228 |
10087 A/T |
|
A (89) |
T (1) |
|
|
1% |
A |
A |
|
IIPGA-IL17D-15748 |
| 16069 |
chr13:19086549 |
10408 C/G |
|
G (83) |
C (5) |
|
|
5% |
G |
G |
rs7988941 |
IIPGA-IL17D-16069 |
| 16427 |
chr13:19086907 |
10766 A/G |
|
G (89) |
A (5) |
|
|
5% |
G |
G |
|
IIPGA-IL17D-16427 |
| 16648 |
chr13:19087128 |
10987 G/T |
|
T (58) |
G (34) |
|
|
36% |
T |
T |
|
IIPGA-IL17D-16648 |
| 16819 |
chr13:19087299 |
11158 C/T |
|
C (89) |
T (5) |
|
|
5% |
C |
C |
|
IIPGA-IL17D-16819 |
| 16832 |
chr13:19087312 |
11171 A/G |
|
A (93) |
G (1) |
|
|
1% |
A |
A |
|
IIPGA-IL17D-16832 |
| 16921 |
chr13:19087401 |
11260 G/T |
|
G (91) |
T (3) |
|
|
3% |
G |
G |
|
IIPGA-IL17D-16921 |
| 16933 |
[not matched: no matching sequences] |
IIPGA-IL17D-16933 |
| 17262 |
chr13:19087741 |
11600 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-IL17D-17262 |
| 17586 |
chr13:19088065 |
11924 C/T |
|
T (93) |
C (1) |
|
|
1% |
T |
T |
|
IIPGA-IL17D-17586 |
| 17686 |
chr13:19088165 |
12024 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-IL17D-17686 |
| 17838 |
chr13:19088317 |
12176 A/G |
|
A (65) |
G (29) |
|
|
31% |
A |
A |
|
IIPGA-IL17D-17838 |
| 18165 |
chr13:19088644 |
12503 C/T |
|
C (90) |
T (4) |
|
|
4% |
C |
C |
|
IIPGA-IL17D-18165 |
| 18355 |
chr13:19088834 |
12693 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-IL17D-18355 |
| 18377 |
chr13:19088856 |
12715 A/G |
|
G (87) |
A (7) |
|
|
7% |
G |
G |
|
IIPGA-IL17D-18377 |
| 18529 |
chr13:19089008 |
12867 C/G |
|
C (84) |
G (10) |
|
|
11% |
C |
C |
|
IIPGA-IL17D-18529 |
| 18577 |
chr13:19089056 |
12915 A/G |
|
A (65) |
G (29) |
|
|
31% |
A |
A |
|
IIPGA-IL17D-18577 |
| 18931 |
chr13:19089410 |
13269 C/G |
|
C (93) |
G (1) |
|
|
1% |
C |
C |
|
IIPGA-IL17D-18931 |
| 18949 |
chr13:19089428 |
13287 A/G |
|
A (93) |
G (1) |
|
|
1% |
A |
A |
|
IIPGA-IL17D-18949 |
| 19007 |
chr13:19089486 |
13345 G/T |
|
G (93) |
T (1) |
|
|
1% |
G |
G |
|
IIPGA-IL17D-19007 |
| 19048 |
chr13:19089527 |
13386 C/G |
|
G (93) |
C (1) |
|
|
1% |
G |
G |
|
IIPGA-IL17D-19048 |
| 19289 |
chr13:19089768 |
13627 A/G |
|
G (66) |
A (28) |
|
|
30% |
G |
G |
|
IIPGA-IL17D-19289 |
| 19305 |
chr13:19089784 |
13643 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-IL17D-19305 |
| 19317 |
chr13:19089796 |
13655 A/G |
|
G (91) |
A (3) |
|
|
3% |
G |
G |
|
IIPGA-IL17D-19317 |
| 19463 |
chr13:19089942 |
13801 A/G |
|
G (65) |
A (29) |
|
|
31% |
G |
G |
|
IIPGA-IL17D-19463 |
| 19490 |
[not matched: no matching sequences] |
IIPGA-IL17D-19490 |
| 19585 |
chr13:19090061 |
13920 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-IL17D-19585 |
| 19977 |
chr13:19090453 |
14312 C/T |
|
C (79) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-IL17D-19977 |
| 21281 |
chr13:19091757 |
15616 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-IL17D-21281 |
| 21302 |
chr13:19091778 |
15637 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-IL17D-21302 |
| 22024 |
chr13:19092500 |
16359 C/T |
|
C (89) |
T (5) |
|
|
5% |
C |
C |
rs7331267 |
IIPGA-IL17D-22024 |
| 22174 |
[not matched: no matching sequences] |
IIPGA-IL17D-22174 |
| 22260 |
chr13:19092735 |
16594 C/G |
|
C (49) |
G (43) |
|
|
46% |
C |
C |
rs2282047 |
IIPGA-IL17D-22260 |
| 22427 |
chr13:19092902 |
16761 C/T |
|
C (91) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-IL17D-22427 |
| 22434 |
chr13:19092909 |
16768 A/C |
|
A (89) |
C (3) |
|
|
3% |
A |
A |
|
IIPGA-IL17D-22434 |
| 22585 |
chr13:19093060 |
16919 A/G |
|
G (91) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-IL17D-22585 |
| 22674 |
chr13:19093149 |
17008 A/G |
|
A (61) |
G (33) |
|
|
35% |
A |
A |
|
IIPGA-IL17D-22674 |
| 22719 |
chr13:19093194 |
17053 C/T |
|
C (61) |
T (33) |
|
|
35% |
C |
C |
rs3847993 |
IIPGA-IL17D-22719 |
| 22883 |
chr13:19093358 |
17217 A/C |
|
C (93) |
A (1) |
|
|
1% |
C |
C |
rs7337605 |
IIPGA-IL17D-22883 |
| 23739 |
chr13:19094214 |
18073 C/G |
|
G (81) |
C (13) |
|
|
14% |
G |
G |
rs4770068 |
IIPGA-IL17D-23739 |
| 23792 |
chr13:19094267 |
18126 A/C |
|
C (61) |
A (33) |
|
|
35% |
C |
C |
|
IIPGA-IL17D-23792 |
| 23823 |
chr13:19094298 |
18157 A/C |
|
C (92) |
A (2) |
|
|
2% |
C |
C |
|
IIPGA-IL17D-23823 |
| 23941 |
chr13:19094416 |
18275 A/C |
|
C (88) |
A (6) |
|
|
6% |
C |
C |
|
IIPGA-IL17D-23941 |
| 24575 |
chr13:19095050 |
18909 C/T |
|
T (65) |
C (29) |
|
|
31% |
T |
T |
rs6783 |
IIPGA-IL17D-24575 |
| 24723 |
chr13:19095198 |
19057 A/T |
|
T (61) |
A (33) |
|
|
35% |
T |
T |
rs7787 |
IIPGA-IL17D-24723 |
| 25000 |
chr13:19095475 |
19334 C/T |
|
C (88) |
T (4) |
|
|
4% |
C |
C |
|
IIPGA-IL17D-25000 |
| 25295 |
chr13:19095770 |
19629 A/G |
|
A (91) |
G (1) |
|
|
1% |
A |
A |
|
IIPGA-IL17D-25295 |
| 25304 |
chr13:19095779 |
19638 A/G |
|
A (59) |
G (33) |
|
|
35% |
A |
A |
|
IIPGA-IL17D-25304 |
| 25356 |
chr13:19095831 |
19690 C/T |
|
C (91) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-IL17D-25356 |
| 25371 |
chr13:19095846 |
19705 A/T |
|
A (64) |
T (28) |
|
|
30% |
A |
A |
|
IIPGA-IL17D-25371 |
| 25377 |
chr13:19095852 |
19711 A/G |
|
G (91) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-IL17D-25377 |
| 25425 |
chr13:19095900 |
19759 C/G |
|
G (91) |
C (1) |
|
|
1% |
G |
G |
|
IIPGA-IL17D-25425 |
| 25551 |
chr13:19096026 |
19885 A/G |
|
A (71) |
G (21) |
|
|
22% |
G |
G |
rs3000677 |
IIPGA-IL17D-25551 |
| 25580 |
chr13:19096055 |
19914 A/G |
|
G (91) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-IL17D-25580 |
|
|
|
| © 2001-2004, Alberto Riva, CHIP |