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SNPper - IIPGA PrettyBase Importer |
Goldenpath: hg16
dbSNP: build 118
Login: pgabot |
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| Imported SNPs |
Position in
refseq |
Absolute
position |
Relative
positions |
AA
change |
All 1 |
All 2 |
All 3 |
All 4 |
Minor allele
frequency |
Base in
refseq |
Known base
(from GoldenPath) |
Known SNP
(from dbSNP) |
Assigned name |
| 3746 |
chr16:88447870 |
-1305 C/T |
|
C (89) |
T (1) |
|
|
1% |
C |
C |
IIPGA-IL17C-3746 |
IIPGA-IL17C-3746 |
| 3747 |
chr16:88447871 |
-1304 A/G |
|
G (86) |
A (4) |
|
|
4% |
G |
G |
IIPGA-IL17C-3747 |
IIPGA-IL17C-3747 |
| 3760 |
chr16:88447884 |
-1291 C/T |
|
C (81) |
T (9) |
|
|
10% |
T |
T |
rs899731 |
IIPGA-IL17C-3760 |
| 3772 |
chr16:88447896 |
-1279 A/T |
|
A (89) |
T (1) |
|
|
1% |
A |
A |
IIPGA-IL17C-3772 |
IIPGA-IL17C-3772 |
| 3779 |
chr16:88447903 |
-1272 A/T |
|
T (89) |
A (1) |
|
|
1% |
T |
T |
IIPGA-IL17C-3779 |
IIPGA-IL17C-3779 |
| 4093 |
chr16:88448217 |
-958 C/T |
|
T (85) |
C (5) |
|
|
5% |
T |
T |
IIPGA-IL17C-4093 |
IIPGA-IL17C-4093 |
| 4330 |
chr16:88448454 |
-721 C/T |
|
C (86) |
T (4) |
|
|
4% |
C |
C |
IIPGA-IL17C-4330 |
IIPGA-IL17C-4330 |
| 4388 |
chr16:88448512 |
-663 C/G |
|
C (88) |
G (4) |
|
|
4% |
C |
C |
IIPGA-IL17C-4388 |
IIPGA-IL17C-4388 |
| 4395 |
chr16:88448519 |
-656 A/G |
|
G (91) |
A (1) |
|
|
1% |
G |
G |
IIPGA-IL17C-4395 |
IIPGA-IL17C-4395 |
| 4487 |
chr16:88448611 |
-564 C/G |
|
C (90) |
G (2) |
|
|
2% |
C |
C |
IIPGA-IL17C-4487 |
IIPGA-IL17C-4487 |
| 4500 |
chr16:88448624 |
-551 C/G |
|
G (91) |
C (1) |
|
|
1% |
G |
G |
IIPGA-IL17C-4500 |
IIPGA-IL17C-4500 |
| 5344 |
chr16:88449468 |
293 C/T |
|
C (92) |
T (2) |
|
|
2% |
C |
C |
IIPGA-IL17C-5344 |
IIPGA-IL17C-5344 |
| 5456 |
chr16:88449580 |
405 A/G |
25 R/G |
A (93) |
G (1) |
|
|
1% |
A |
A |
IIPGA-IL17C-5456 |
IIPGA-IL17C-5456 |
| 5805 |
chr16:88449929 |
754 C/T |
|
C (64) |
T (30) |
|
|
32% |
T |
T |
rs2254073 |
IIPGA-IL17C-5805 |
| 5871 |
chr16:88449995 |
820 G/T |
|
G (90) |
T (4) |
|
|
4% |
G |
G |
IIPGA-IL17C-5871 |
IIPGA-IL17C-5871 |
| 5908 |
chr16:88450032 |
857 C/G |
|
G (67) |
C (27) |
|
|
29% |
C |
C |
rs869411 |
IIPGA-IL17C-5908 |
| 6004 |
chr16:88450128 |
953 G/T |
|
G (93) |
T (1) |
|
|
1% |
G |
G |
IIPGA-IL17C-6004 |
IIPGA-IL17C-6004 |
| 6331 |
chr16:88450455 |
1280 C/T |
148 S/S |
C (88) |
T (6) |
|
|
6% |
C |
C |
IIPGA-IL17C-6331 |
IIPGA-IL17C-6331 |
| 6611 |
chr16:88450735 |
1560 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
IIPGA-IL17C-6611 |
IIPGA-IL17C-6611 |
| 6989 |
chr16:88451113 |
1938 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
IIPGA-IL17C-6989 |
IIPGA-IL17C-6989 |
| 7269 |
chr16:88451393 |
2218 A/T |
|
A (64) |
T (28) |
|
|
30% |
T |
T |
rs4782390 |
IIPGA-IL17C-7269 |
| 7718 |
chr16:88451842 |
2667 A/T |
|
A (79) |
T (13) |
|
|
14% |
A |
A |
IIPGA-IL17C-7718 |
IIPGA-IL17C-7718 |
| 7771 |
chr16:88451895 |
2720 C/T |
|
C (90) |
T (2) |
|
|
2% |
C |
C |
IIPGA-IL17C-7771 |
IIPGA-IL17C-7771 |
|
|
|
| © 2001-2004, Alberto Riva, CHIP |