 |
SNPper - IIPGA PrettyBase Importer |
Goldenpath: hg16
dbSNP: build 118
Login: pgabot |
 |
|
|
| |
| Prettybase importer |
| Gene: |
EGFR |
Region searched: |
chr7:54818554-55026774 |
| Match orientation: |
Forward |
Processing time: |
1 minute, 17.4 seconds |
| Total SNPs: |
221 |
Correct: |
214 |
|
|
| Imported SNPs |
Position in
refseq |
Absolute
position |
Relative
positions |
AA
change |
All 1 |
All 2 |
All 3 |
All 4 |
Minor allele
frequency |
Base in
refseq |
Known base
(from GoldenPath) |
Known SNP
(from dbSNP) |
Assigned name |
| 3533 |
chr7:54827075 |
-1645 A/G |
|
G (85) |
A (9) |
|
|
10% |
G |
G |
|
IIPGA-EGFR-3533 |
| 3745 |
chr7:54827287 |
-1433 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-3745 |
| 3880 |
chr7:54827422 |
-1298 A/G |
|
G (89) |
A (5) |
|
|
5% |
G |
G |
|
IIPGA-EGFR-3880 |
| 3931 |
chr7:54827473 |
-1247 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
rs6593197 |
IIPGA-EGFR-3931 |
| 3953 |
chr7:54827495 |
-1225 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-3953 |
| 4419 |
chr7:54827961 |
-759 A/C |
|
C (82) |
A (10) |
|
|
11% |
A |
A |
rs759171 |
IIPGA-EGFR-4419 |
| 4599 |
chr7:54828141 |
-579 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-4599 |
| 4696 |
chr7:54828238 |
-482 A/C |
|
C (93) |
A (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-4696 |
| 4791 |
chr7:54828333 |
-387 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-4791 |
| 4962 |
chr7:54828504 |
-216 G/T |
|
G (60) |
T (34) |
|
|
36% |
G |
G |
rs712829 |
IIPGA-EGFR-4962 |
| 4987 |
chr7:54828529 |
-191 A/C |
|
C (90) |
A (4) |
|
|
4% |
A |
A |
rs712830 |
IIPGA-EGFR-4987 |
| 5328 |
chr7:54828870 |
150 C/G |
|
G (92) |
C (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-5328 |
| 5346 |
chr7:54828888 |
168 G/T |
|
G (84) |
T (10) |
|
|
11% |
G |
G |
|
IIPGA-EGFR-5346 |
| 127560 |
chr7:54951102 |
122382 C/T |
|
C (91) |
T (3) |
|
|
3% |
C |
C |
|
IIPGA-EGFR-127560 |
| 127601 |
chr7:54951143 |
122423 C/T |
|
T (93) |
C (1) |
|
|
1% |
T |
T |
|
IIPGA-EGFR-127601 |
| 127844 |
chr7:54951386 |
122666 A/C |
|
C (58) |
A (36) |
|
|
38% |
C |
C |
rs6964705 |
IIPGA-EGFR-127844 |
| 127868 |
chr7:54951410 |
122690 G/T |
|
T (93) |
G (1) |
|
|
1% |
T |
T |
|
IIPGA-EGFR-127868 |
| 127895 |
chr7:54951437 |
122717 A/T |
|
A (93) |
T (1) |
|
|
1% |
A |
A |
|
IIPGA-EGFR-127895 |
| 127919 |
chr7:54951461 |
122741 C/T |
|
T (90) |
C (4) |
|
|
4% |
T |
T |
|
IIPGA-EGFR-127919 |
| 128751 |
chr7:54952293 |
123573 C/T |
|
C (92) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-128751 |
| 129118 |
chr7:54952660 |
123940 A/G |
|
G (91) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-129118 |
| 129523 |
chr7:54953065 |
124345 A/G |
|
G (88) |
A (4) |
|
|
4% |
G |
G |
rs4947984 |
IIPGA-EGFR-129523 |
| 132380 |
chr7:54955922 |
127202 C/T |
|
T (89) |
C (3) |
|
|
3% |
T |
T |
|
IIPGA-EGFR-132380 |
| 132393 |
chr7:54955935 |
127215 G/T |
|
G (89) |
T (3) |
|
|
3% |
G |
G |
|
IIPGA-EGFR-132393 |
| 132395 |
chr7:54955937 |
127217 C/T |
|
T (91) |
C (1) |
|
|
1% |
T |
T |
|
IIPGA-EGFR-132395 |
| 132555 |
chr7:54956097 |
127377 C/T |
158 N/N |
C (49) |
T (45) |
|
|
48% |
C |
C |
rs2072454 |
IIPGA-EGFR-132555 |
| 132612 |
chr7:54956154 |
127434 A/G |
177 S/S |
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-132612 |
| 132650 |
chr7:54956192 |
127472 A/G |
|
G (85) |
A (9) |
|
|
10% |
G |
G |
rs7801956 |
IIPGA-EGFR-132650 |
| 132854 |
chr7:54956396 |
127676 G/T |
|
G (49) |
T (45) |
|
|
48% |
G |
G |
rs2270247 |
IIPGA-EGFR-132854 |
| 132988 |
chr7:54956530 |
127810 C/T |
|
C (92) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-132988 |
| 136956 |
chr7:54960498 |
131778 A/G |
|
G (90) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-136956 |
| 137010 |
chr7:54960552 |
131832 A/T |
|
T (91) |
A (3) |
|
|
3% |
T |
T |
|
IIPGA-EGFR-137010 |
| 137110 |
chr7:54960652 |
131932 C/T |
|
C (50) |
T (42) |
|
|
45% |
T |
T |
rs2075109 |
IIPGA-EGFR-137110 |
| 137302 |
chr7:54960844 |
132124 C |
|
C (93) |
X (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-137302 |
| 137366 |
chr7:54960908 |
132188 C/T |
|
T (54) |
C (38) |
|
|
40% |
C |
C |
rs2075110 |
IIPGA-EGFR-137366 |
| 137497 |
chr7:54961039 |
132319 C/T |
|
C (47) |
T (45) |
|
|
48% |
T |
T |
rs6944695 |
IIPGA-EGFR-137497 |
| 137514 |
chr7:54961056 |
132336 C/G |
|
G (47) |
C (45) |
|
|
48% |
C |
C |
rs2075111 |
IIPGA-EGFR-137514 |
| 137642 |
chr7:54961184 |
132464 C/T |
|
C (90) |
T (4) |
|
|
4% |
C |
C |
rs6959438 |
IIPGA-EGFR-137642 |
| 137690 |
chr7:54961232 |
132512 C/T |
|
C (91) |
T (3) |
|
|
3% |
C |
C |
|
IIPGA-EGFR-137690 |
| 137740 |
chr7:54961282 |
132562 C/T |
|
T (91) |
C (3) |
|
|
3% |
T |
T |
|
IIPGA-EGFR-137740 |
| 137781 |
chr7:54961323 |
132603 C/G |
|
C (92) |
G (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-137781 |
| 137799 |
chr7:54961341 |
132621 C |
|
C (55) |
X (39) |
|
|
41% |
C |
C |
|
IIPGA-EGFR-137799 |
| 137818 |
chr7:54961360 |
132640 A/G |
|
G (61) |
A (33) |
|
|
35% |
A |
A |
rs2075112 |
IIPGA-EGFR-137818 |
| 137919 |
chr7:54961461 |
132741 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-137919 |
| 138043 |
chr7:54961585 |
132865 C/T |
|
C (91) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-138043 |
| 138111 |
chr7:54961653 |
132933 G |
|
G (92) |
X (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-138111 |
| 138116 |
chr7:54961658 |
132938 G/T |
|
G (93) |
T (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-138116 |
| 138384 |
chr7:54961926 |
133206 A/G |
|
G (57) |
A (37) |
|
|
39% |
A |
A |
|
IIPGA-EGFR-138384 |
| 138859 |
chr7:54962401 |
133681 C/T |
|
T (92) |
C (2) |
|
|
2% |
T |
T |
|
IIPGA-EGFR-138859 |
| 139019 |
chr7:54962561 |
133841 A/T |
|
A (92) |
T (2) |
|
|
2% |
A |
A |
|
IIPGA-EGFR-139019 |
| 139112 |
chr7:54962654 |
133934 C/T |
|
C (85) |
T (9) |
|
|
10% |
C |
C |
|
IIPGA-EGFR-139112 |
| 139141 |
chr7:54962683 |
133963 G/T |
|
G (92) |
T (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-139141 |
| 139374 |
chr7:54962916 |
134196 A/G |
|
A (85) |
G (9) |
|
|
10% |
A |
A |
|
IIPGA-EGFR-139374 |
| 139654 |
chr7:54963196 |
134476 C/G |
|
G (53) |
C (41) |
|
|
44% |
C |
C |
|
IIPGA-EGFR-139654 |
| 139676 |
chr7:54963218 |
134498 C/T |
|
C (85) |
T (9) |
|
|
10% |
C |
C |
|
IIPGA-EGFR-139676 |
| 139862 |
chr7:54963404 |
134684 A/G |
|
G (72) |
A (22) |
|
|
23% |
G |
G |
rs4947986 |
IIPGA-EGFR-139862 |
| 140070 |
chr7:54963612 |
134892 G/T |
|
G (93) |
T (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-140070 |
| 140193 |
chr7:54963735 |
135015 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-140193 |
| 140232 |
chr7:54963774 |
135054 C/G |
|
C (93) |
G (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-140232 |
| 140400 |
chr7:54963942 |
135222 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-140400 |
| 140962 |
chr7:54964504 |
135784 A/G |
|
G (76) |
A (18) |
|
|
19% |
G |
G |
|
IIPGA-EGFR-140962 |
| 141161 |
chr7:54964703 |
135983 A/G |
|
G (75) |
A (19) |
|
|
20% |
G |
G |
|
IIPGA-EGFR-141161 |
| 141273 |
chr7:54964815 |
136095 C/T |
|
C (92) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-141273 |
| 141383 |
chr7:54964925 |
136205 A/G |
|
A (53) |
G (41) |
|
|
44% |
G |
G |
rs6950826 |
IIPGA-EGFR-141383 |
| 141885 |
chr7:54965427 |
136707 A/G |
|
G (91) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-141885 |
| 141997 |
chr7:54965539 |
136819 C/T |
|
C (61) |
T (33) |
|
|
35% |
T |
T |
rs3735059 |
IIPGA-EGFR-141997 |
| 142264 |
chr7:54965806 |
137086 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-142264 |
| 142271 |
chr7:54965813 |
137093 C/G |
|
C (92) |
G (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-142271 |
| 142787 |
chr7:54966329 |
137609 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-142787 |
| 143223 |
chr7:54966765 |
138045 A/G |
|
A (89) |
G (1) |
|
|
1% |
A |
A |
|
IIPGA-EGFR-143223 |
| 143319 |
chr7:54966861 |
138141 A |
|
A (89) |
X (3) |
|
|
3% |
A |
A |
|
IIPGA-EGFR-143319 |
| 143321 |
chr7:54966863 |
138143 C/G |
|
G (93) |
C (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-143321 |
| 143347 |
chr7:54966889 |
138169 C/G |
|
G (64) |
C (30) |
|
|
32% |
G |
G |
|
IIPGA-EGFR-143347 |
| 143360 |
chr7:54966902 |
138182 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-143360 |
| 143377 |
chr7:54966919 |
138199 C/G |
|
C (73) |
G (13) |
|
|
14% |
G |
G |
rs4947987 |
IIPGA-EGFR-143377 |
| 144065 |
chr7:54967607 |
138887 A/T |
|
T (90) |
A (2) |
|
|
2% |
T |
T |
|
IIPGA-EGFR-144065 |
| 145591 |
chr7:54969133 |
140413 C/T |
|
T (83) |
C (1) |
|
|
1% |
T |
T |
|
IIPGA-EGFR-145591 |
| 145595 |
chr7:54969137 |
140417 A/T |
|
A (83) |
T (1) |
|
|
1% |
A |
A |
|
IIPGA-EGFR-145595 |
| 145681 |
chr7:54969223 |
140503 A/G |
|
G (91) |
A (3) |
|
|
3% |
G |
G |
|
IIPGA-EGFR-145681 |
| 145717 |
chr7:54969259 |
140539 A/G |
|
G (87) |
A (7) |
|
|
7% |
G |
G |
|
IIPGA-EGFR-145717 |
| 145842 |
chr7:54969384 |
140664 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-145842 |
| 146057 |
chr7:54969599 |
140879 A/G |
439 A/A |
A (92) |
G (2) |
|
|
2% |
A |
A |
|
IIPGA-EGFR-146057 |
| 146260 |
chr7:54969802 |
141082 A/T |
|
T (62) |
A (32) |
|
|
34% |
A |
A |
rs1558544 |
IIPGA-EGFR-146260 |
| 146380 |
chr7:54969922 |
141202 C/T |
|
T (67) |
C (27) |
|
|
29% |
C |
C |
rs759162 |
IIPGA-EGFR-146380 |
| 146535 |
chr7:54970077 |
141357 C |
|
C (93) |
X (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-146535 |
| 146586 |
chr7:54970128 |
141408 A/G |
|
G (90) |
A (4) |
|
|
4% |
G |
G |
|
IIPGA-EGFR-146586 |
| 146813 |
chr7:54970355 |
141635 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-146813 |
| 146842 |
chr7:54970384 |
141664 C |
|
C (92) |
X (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-146842 |
| 146864 |
chr7:54970406 |
141686 G/T |
|
G (93) |
T (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-146864 |
| 147222 |
chr7:54970764 |
142044 A/G |
|
A (77) |
G (17) |
|
|
18% |
A |
A |
|
IIPGA-EGFR-147222 |
| 147409 |
chr7:54970951 |
142231 C/T |
503 G/G |
C (91) |
T (3) |
|
|
3% |
C |
C |
|
IIPGA-EGFR-147409 |
| 147462 |
chr7:54971004 |
142284 A/G |
521 R/K |
G (77) |
A (17) |
|
|
18% |
G |
G |
|
IIPGA-EGFR-147462 |
| 147750 |
chr7:54971292 |
142572 C/T |
|
T (78) |
C (16) |
|
|
17% |
T |
T |
rs3752651 |
IIPGA-EGFR-147750 |
| 147815 |
chr7:54971357 |
142637 A/T |
|
A (93) |
T (1) |
|
|
1% |
A |
A |
|
IIPGA-EGFR-147815 |
| 147867 |
chr7:54971409 |
142689 C/T |
|
C (92) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-147867 |
| 147868 |
chr7:54971410 |
142690 A/G |
|
G (91) |
A (3) |
|
|
3% |
G |
G |
|
IIPGA-EGFR-147868 |
| 149633 |
chr7:54973175 |
144455 C/T |
544 G/G |
T (92) |
C (2) |
|
|
2% |
T |
T |
|
IIPGA-EGFR-149633 |
| 149749 |
chr7:54973291 |
144571 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-149749 |
| 149791 |
chr7:54973333 |
144613 C/T |
|
T (92) |
C (2) |
|
|
2% |
T |
T |
|
IIPGA-EGFR-149791 |
| 149859 |
chr7:54973401 |
144681 G/T |
|
G (92) |
T (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-149859 |
| 149892 |
chr7:54973434 |
144714 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-149892 |
| 150886 |
chr7:54974428 |
145708 C/T |
|
C (90) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-150886 |
| 150933 |
chr7:54974475 |
145755 G/T |
|
G (78) |
T (16) |
|
|
17% |
G |
G |
|
IIPGA-EGFR-150933 |
| 151092 |
chr7:54974634 |
145914 C/T |
|
C (92) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-151092 |
| 151116 |
chr7:54974658 |
145938 G/T |
|
T (92) |
G (2) |
|
|
2% |
T |
T |
|
IIPGA-EGFR-151116 |
| 151245 |
chr7:54974787 |
146067 A/G |
596 P/P |
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-151245 |
| 151296 |
chr7:54974838 |
146118 C/T |
613 A/A |
C (91) |
T (3) |
|
|
3% |
C |
C |
|
IIPGA-EGFR-151296 |
| 151371 |
chr7:54974913 |
146193 C/T |
|
C (92) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-151371 |
| 151392 |
chr7:54974934 |
146214 C/T |
|
C (91) |
T (3) |
|
|
3% |
C |
C |
|
IIPGA-EGFR-151392 |
| 151414 |
chr7:54974956 |
146236 A/C |
|
C (92) |
A (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-151414 |
| 151632 |
[not matched: no matching sequences] |
IIPGA-EGFR-151632 |
| 151678 |
[not matched: no matching sequences] |
IIPGA-EGFR-151678 |
| 156191 |
chr7:54979726 |
151006 C/T |
|
T (91) |
C (3) |
|
|
3% |
T |
T |
|
IIPGA-EGFR-156191 |
| 156301 |
chr7:54979836 |
151116 C/T |
|
C (83) |
T (11) |
|
|
12% |
C |
C |
|
IIPGA-EGFR-156301 |
| 156441 |
chr7:54979976 |
151256 C/T |
|
C (92) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-156441 |
| 156467 |
chr7:54980002 |
151282 A/G/T |
|
G (89) |
T (3) |
A (2) |
|
3% |
G |
G |
|
IIPGA-EGFR-156467 |
| 156482 |
chr7:54980017 |
151297 A/G |
|
G (67) |
A (27) |
|
|
29% |
G |
G |
|
IIPGA-EGFR-156482 |
| 156594 |
chr7:54980129 |
151409 A/G |
|
A (91) |
G (3) |
|
|
3% |
A |
A |
|
IIPGA-EGFR-156594 |
| 156678 |
chr7:54980213 |
151493 G/T |
|
T (67) |
G (27) |
|
|
29% |
T |
T |
|
IIPGA-EGFR-156678 |
| 156856 |
chr7:54980391 |
151671 C/T |
|
C (92) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-156856 |
| 157088 |
chr7:54980623 |
151903 A/T |
629 T/T |
T (65) |
A (29) |
|
|
31% |
T |
T |
|
IIPGA-EGFR-157088 |
| 157254 |
chr7:54980789 |
152069 G/T |
|
T (90) |
G (2) |
|
|
2% |
T |
T |
|
IIPGA-EGFR-157254 |
| 157256 |
chr7:54980791 |
152071 A/G |
|
A (91) |
G (1) |
|
|
1% |
A |
A |
|
IIPGA-EGFR-157256 |
| 157294 |
chr7:54980829 |
152109 A/G |
|
G (89) |
A (3) |
|
|
3% |
G |
G |
|
IIPGA-EGFR-157294 |
| 157303 |
chr7:54980838 |
152118 C/T |
|
C (90) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-157303 |
| 157378 |
chr7:54980913 |
152193 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-157378 |
| 158642 |
chr7:54982177 |
153457 A/G |
|
A (88) |
G (4) |
|
|
4% |
A |
A |
|
IIPGA-EGFR-158642 |
| 158675 |
chr7:54982210 |
153490 C/G |
|
G (73) |
C (21) |
|
|
22% |
G |
G |
rs2241055 |
IIPGA-EGFR-158675 |
| 159096 |
chr7:54982631 |
153911 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-159096 |
| 159322 |
chr7:54982857 |
154137 C/G |
|
G (91) |
C (3) |
|
|
3% |
G |
G |
|
IIPGA-EGFR-159322 |
| 159535 |
chr7:54983070 |
154350 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
rs6952904 |
IIPGA-EGFR-159535 |
| 159724 |
chr7:54983259 |
154539 A/C |
|
C (91) |
A (3) |
|
|
3% |
C |
C |
|
IIPGA-EGFR-159724 |
| 159969 |
chr7:54983504 |
154784 A/G |
|
G (88) |
A (6) |
|
|
6% |
G |
G |
|
IIPGA-EGFR-159969 |
| 160050 |
chr7:54983585 |
154865 C/T |
|
C (91) |
T (3) |
|
|
3% |
C |
C |
|
IIPGA-EGFR-160050 |
| 160104 |
chr7:54983639 |
154919 A/G |
|
A (93) |
G (1) |
|
|
1% |
A |
A |
|
IIPGA-EGFR-160104 |
| 160239 |
chr7:54983774 |
155054 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-160239 |
| 160247 |
chr7:54983782 |
155062 A/G |
|
G (88) |
A (6) |
|
|
6% |
G |
G |
|
IIPGA-EGFR-160247 |
| 160286 |
chr7:54983821 |
155101 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-160286 |
| 160377 |
chr7:54983912 |
155192 A/G |
|
G (88) |
A (6) |
|
|
6% |
G |
G |
|
IIPGA-EGFR-160377 |
| 160415 |
chr7:54983950 |
155230 A/T |
|
A (92) |
T (2) |
|
|
2% |
A |
A |
|
IIPGA-EGFR-160415 |
| 160796 |
chr7:54984331 |
155611 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-160796 |
| 160823 |
chr7:54984358 |
155638 A/G |
|
A (78) |
G (16) |
|
|
17% |
A |
A |
rs2017000 |
IIPGA-EGFR-160823 |
| 160852 |
chr7:54984387 |
155667 C/T |
|
T (91) |
C (3) |
|
|
3% |
T |
T |
|
IIPGA-EGFR-160852 |
| 160990 |
chr7:54984525 |
155805 A/G |
|
G (90) |
A (4) |
|
|
4% |
G |
G |
|
IIPGA-EGFR-160990 |
| 160996 |
chr7:54984531 |
155811 C/T |
|
C (70) |
T (24) |
|
|
26% |
T |
T |
rs712831 |
IIPGA-EGFR-160996 |
| 166445 |
chr7:54989980 |
161260 A/G |
|
G (60) |
A (34) |
|
|
36% |
A |
A |
|
IIPGA-EGFR-166445 |
| 166476 |
chr7:54990011 |
161291 A/T |
|
T (92) |
A (2) |
|
|
2% |
T |
T |
|
IIPGA-EGFR-166476 |
| 166557 |
chr7:54990092 |
161372 A/C |
|
A (89) |
C (5) |
|
|
5% |
A |
A |
|
IIPGA-EGFR-166557 |
| 166702 |
chr7:54990237 |
161517 A/G |
|
A (60) |
G (34) |
|
|
36% |
G |
G |
|
IIPGA-EGFR-166702 |
| 167001 |
chr7:54990536 |
161816 C/T |
|
C (63) |
T (31) |
|
|
33% |
T |
T |
|
IIPGA-EGFR-167001 |
| 167140 |
chr7:54990675 |
161955 C/T |
|
T (73) |
C (21) |
|
|
22% |
T |
T |
|
IIPGA-EGFR-167140 |
| 167144 |
chr7:54990679 |
161959 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-167144 |
| 167277 |
chr7:54990812 |
162092 A/G |
787 Q/Q |
A (51) |
G (43) |
|
|
46% |
G |
G |
|
IIPGA-EGFR-167277 |
| 167485 |
chr7:54991020 |
162300 C/G |
|
G (93) |
C (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-167485 |
| 167704 |
chr7:54991239 |
162519 A/G |
|
G (91) |
A (3) |
|
|
3% |
G |
G |
|
IIPGA-EGFR-167704 |
| 167779 |
chr7:54991314 |
162594 G/T |
|
G (93) |
T (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-167779 |
| 167926 |
chr7:54991461 |
162741 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-167926 |
| 177511 |
chr7:55001046 |
172326 A/G |
|
A (90) |
G (4) |
|
|
4% |
A |
A |
|
IIPGA-EGFR-177511 |
| 177643 |
chr7:55001178 |
172458 A/G |
829 E/E |
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-177643 |
| 177664 |
chr7:55001199 |
172479 C/T |
836 R/R |
C (90) |
T (4) |
|
|
4% |
C |
C |
|
IIPGA-EGFR-177664 |
| 177977 |
chr7:55001512 |
172792 A/G |
|
G (68) |
A (26) |
|
|
28% |
A |
A |
rs6970262 |
IIPGA-EGFR-177977 |
| 178162 |
chr7:55001697 |
172977 C/G |
|
C (78) |
G (16) |
|
|
17% |
C |
C |
|
IIPGA-EGFR-178162 |
| 178230 |
chr7:55001765 |
173045 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-178230 |
| 178236 |
chr7:55001771 |
173051 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-178236 |
| 178343 |
chr7:55001878 |
173158 G/T |
|
T (93) |
G (1) |
|
|
1% |
T |
T |
rs2692451 |
IIPGA-EGFR-178343 |
| 178500 |
chr7:55002035 |
173315 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-178500 |
| 178555 |
chr7:55002090 |
173370 C/G |
|
C (90) |
G (4) |
|
|
4% |
C |
C |
|
IIPGA-EGFR-178555 |
| 178572 |
chr7:55002107 |
173387 C/G |
|
G (90) |
C (4) |
|
|
4% |
G |
G |
|
IIPGA-EGFR-178572 |
| 178654 |
chr7:55002189 |
173469 C/T |
|
C (90) |
T (4) |
|
|
4% |
C |
C |
|
IIPGA-EGFR-178654 |
| 179105 |
chr7:55002640 |
173920 A/G |
|
G (89) |
A (3) |
|
|
3% |
G |
G |
|
IIPGA-EGFR-179105 |
| 179138 |
chr7:55002673 |
173953 G/T |
|
T (88) |
G (4) |
|
|
4% |
T |
T |
|
IIPGA-EGFR-179138 |
| 184441 |
chr7:55007976 |
179256 C/T |
|
C (89) |
T (5) |
|
|
5% |
C |
C |
|
IIPGA-EGFR-184441 |
| 184631 |
chr7:55008166 |
179446 C/T |
903 T/T |
C (80) |
T (14) |
|
|
15% |
T |
T |
rs1140475 |
IIPGA-EGFR-184631 |
| 184670 |
chr7:55008205 |
179485 C/T |
916 D/D |
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-184670 |
| 184971 |
chr7:55008506 |
179786 C/T |
|
C (69) |
T (25) |
|
|
27% |
C |
C |
rs2293348 |
IIPGA-EGFR-184971 |
| 185054 |
chr7:55008589 |
179869 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-185054 |
| 185089 |
chr7:55008624 |
179904 C/G |
|
C (92) |
G (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-185089 |
| 185374 |
chr7:55008909 |
180189 A/C |
|
A (89) |
C (5) |
|
|
5% |
A |
A |
|
IIPGA-EGFR-185374 |
| 185395 |
chr7:55008930 |
180210 C/T |
|
C (92) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-185395 |
| 185672 |
chr7:55009207 |
180487 G/T |
|
T (84) |
G (10) |
|
|
11% |
T |
T |
rs2740764 |
IIPGA-EGFR-185672 |
| 185689 |
chr7:55009224 |
180504 C |
|
C (87) |
X (7) |
|
|
7% |
C |
C |
|
IIPGA-EGFR-185689 |
| 185708 |
chr7:55009243 |
180523 C/T |
|
C (92) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-185708 |
| 185913 |
chr7:55009448 |
180728 A/C |
|
A (92) |
C (2) |
|
|
2% |
A |
A |
|
IIPGA-EGFR-185913 |
| 185962 |
chr7:55009497 |
180777 A/T |
|
A (91) |
T (3) |
|
|
3% |
A |
A |
|
IIPGA-EGFR-185962 |
| 186010 |
chr7:55009545 |
180825 G/T |
|
G (91) |
T (3) |
|
|
3% |
G |
G |
|
IIPGA-EGFR-186010 |
| 186035 |
chr7:55009570 |
180850 C/T |
|
C (91) |
T (3) |
|
|
3% |
C |
C |
|
IIPGA-EGFR-186035 |
| 186058 |
chr7:55009593 |
180873 C/T |
|
C (91) |
T (3) |
|
|
3% |
C |
C |
|
IIPGA-EGFR-186058 |
| 186511 |
chr7:55010046 |
181326 C/T |
|
C (89) |
T (5) |
|
|
5% |
C |
C |
|
IIPGA-EGFR-186511 |
| 186514 |
chr7:55010049 |
181329 A/C |
|
A (89) |
C (5) |
|
|
5% |
A |
A |
|
IIPGA-EGFR-186514 |
| 186561 |
chr7:55010096 |
181376 A/G |
|
G (91) |
A (3) |
|
|
3% |
G |
G |
|
IIPGA-EGFR-186561 |
| 186967 |
chr7:55010502 |
181782 A/G |
|
G (93) |
A (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-186967 |
| 187130 |
chr7:55010665 |
181945 C/T |
994 D/D |
C (85) |
T (9) |
|
|
10% |
C |
C |
rs2293347 |
IIPGA-EGFR-187130 |
| 187462 |
chr7:55010997 |
182277 G/T |
|
G (93) |
T (1) |
|
|
1% |
G |
G |
|
IIPGA-EGFR-187462 |
| 187478 |
chr7:55011013 |
182293 G/T |
|
T (89) |
G (5) |
|
|
5% |
T |
T |
|
IIPGA-EGFR-187478 |
| 187725 |
chr7:55011260 |
182540 C/T |
|
C (92) |
T (2) |
|
|
2% |
C |
C |
|
IIPGA-EGFR-187725 |
| 187734 |
chr7:55011269 |
182549 A/G |
|
A (93) |
G (1) |
|
|
1% |
A |
A |
|
IIPGA-EGFR-187734 |
| 187757 |
chr7:55011292 |
182572 A |
|
X (89) |
A (5) |
|
|
5% |
A |
T |
|
IIPGA-EGFR-187757 |
| 187783 |
[not matched: no matching sequences] |
IIPGA-EGFR-187783 |
| 187857 |
chr7:55011391 |
182671 C/T |
|
C (87) |
T (3) |
|
|
3% |
C |
C |
|
IIPGA-EGFR-187857 |
| 187891 |
[not matched: no matching sequences] |
IIPGA-EGFR-187891 |
| 188069 |
chr7:55011601 |
182881 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-188069 |
| 188093 |
chr7:55011625 |
182905 A/G |
|
G (89) |
A (5) |
|
|
5% |
G |
G |
|
IIPGA-EGFR-188093 |
| 188123 |
chr7:55011655 |
182935 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-188123 |
| 188337 |
chr7:55011869 |
183149 A/G |
|
A (89) |
G (5) |
|
|
5% |
A |
A |
|
IIPGA-EGFR-188337 |
| 188474 |
chr7:55012006 |
183286 C/T |
1070 S/S |
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-188474 |
| 190871 |
chr7:55014403 |
185683 C/T |
|
T (89) |
C (5) |
|
|
5% |
T |
T |
|
IIPGA-EGFR-190871 |
| 191043 |
chr7:55014575 |
185855 A/G |
|
A (79) |
G (15) |
|
|
16% |
G |
G |
rs2692456 |
IIPGA-EGFR-191043 |
| 191379 |
chr7:55014911 |
186191 A/G |
1162 S/N |
G (91) |
A (3) |
|
|
3% |
G |
G |
|
IIPGA-EGFR-191379 |
| 191562 |
chr7:55015094 |
186374 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-191562 |
| 191585 |
[not matched: no matching sequences] |
IIPGA-EGFR-191585 |
| 191616 |
[not matched: no matching sequences] |
IIPGA-EGFR-191616 |
| 192312 |
chr7:55015833 |
187113 C/T |
|
T (88) |
C (6) |
|
|
6% |
T |
T |
rs884225 |
IIPGA-EGFR-192312 |
| 192608 |
chr7:55016129 |
187409 C/T |
|
T (91) |
C (3) |
|
|
3% |
T |
T |
|
IIPGA-EGFR-192608 |
| 192972 |
chr7:55016493 |
187773 C/T |
|
T (93) |
C (1) |
|
|
1% |
T |
T |
|
IIPGA-EGFR-192972 |
| 193172 |
chr7:55016693 |
187973 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-193172 |
| 193188 |
chr7:55016709 |
187989 C |
|
C (91) |
X (3) |
|
|
3% |
C |
C |
|
IIPGA-EGFR-193188 |
| 193614 |
chr7:55017135 |
188415 A/G |
|
G (92) |
A (2) |
|
|
2% |
G |
G |
|
IIPGA-EGFR-193614 |
| 193710 |
chr7:55017231 |
188511 A/G |
|
G (88) |
A (6) |
|
|
6% |
G |
G |
rs884904 |
IIPGA-EGFR-193710 |
| 193739 |
chr7:55017260 |
188540 G/T |
|
T (93) |
G (1) |
|
|
1% |
T |
T |
|
IIPGA-EGFR-193739 |
| 193864 |
chr7:55017385 |
188665 C/T |
|
C (93) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-EGFR-193864 |
| 194015 |
[not matched: no matching sequences] |
IIPGA-EGFR-194015 |
|
|
|
| © 2001-2004, Alberto Riva, CHIP |