integrin alpha M precursor

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Innate Immunity PGA, Gene ITGAM, Genotype Counts (0% SNPs)

SNP	Offset	Genotype	Cases	Controls	Combined	Cases HW P*	Controls HW P*	All HW P*
4753	-323	A:A	185	231	416	0.4110	0.0624	0.0725
4753	-323	A:G	215	219	434	0.4110	0.0624	0.0725
4753	-323	G:G	52	33	85	0.4110	0.0624	0.0725
22817	17741	C:C	16	11	27	0.0694	0.4463	0.0655
22817	17741	C:T	112	108	220	0.0694	0.4463	0.0655
22817	17741	T:T	359	340	699	0.0694	0.4463	0.0655
23086	18010	C:C	28	39	67	0.0002	<0.0001	0.0000
23086	18010	C:T	110	85	195	0.0002	<0.0001	0.0000
23086	18010	T:T	313	257	570	0.0002	<0.0001	0.0000
70413	65333	A:A	43	39	82	0.7428	0.1885	0.2578
70413	65333	A:G	196	163	359	0.7428	0.1885	0.2578
70413	65333	G:G	238	232	470	0.7428	0.1885	0.2578
70582	65502	C:C	349	351	700	0.5817	0.2764	0.1923
70582	65502	C:T	116	138	254	0.5817	0.2764	0.1923
70582	65502	T:T	12	19	31	0.5817	0.2764	0.1923
76489	71404	-:-	0	14	14	<0.0001	<0.0001	0.0000
76489	71404	-:TGT	172	179	351	<0.0001	<0.0001	0.0000
76489	71404	TGT:TGT	109	104	213	<0.0001	<0.0001	0.0000

Note: Numbers shown in the SNP column give the location of each SNP in the
reference sequence for this gene, where the first base of the reference
sequence is counted as 1. Numbers in the Offset column give the location
of the SNP relative to the gene start transcription site,
as calculated by SNPper (http://bio.chip.org:8080/bio/)

*HWE P = Hardy-Weinberg equilibrium P values.
These are calculated using an exact method as suggested in
Haldane, JBS. 1954. "An exact test for randomness of mating",
Journal of Genetics 52:631-635.

Innate Immunity in Heart, Lung and Blood Disease

Programs for Genomic Applications