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The following information is based on the unmasked version of the consensus sequence. We have also generated data for the masked version of the assembly. There is also an Introduction available if you are looking for a place to get started.

Information
Name catenin (cadherin-associated protein), beta 1,
Source InnateImmunity
Chromosome chr3 (+) (chr3:41216016-41256938)
Accession NM_001904
SNPs 27
Indels 0
Populations 4
Subjects 0
Links [ SNPper ] [ GoldenPath ] [ Gene Image ] [ LocusLink ] [ Omim ] [ PubMed ]
Biological Significance ß-catenin a transcriptional coactivator, is part of the intracellular signal transduction pathways triggered by LPS in human macrophages, and appears to be involved in both LPS-induction of gene transcription and LPS-dependent regulation of vascular permeability. Exposure of alveolar macrophages to bacterial LPS results in the activation of a number of signal transduction pathways. An early event after the alveolar macrophage comes in contact with LPS is activation of PI 3-kinase and phosphorylation of Akt. In turn, Akt activation results in the phosphorylation-dependent inactivation of glycogen synthase kinase (GSK-3). Inactivation of GSK-3 reduces the ubiquitination of ß-catenin, resulting in nuclear accumulation and expression of genes that require nuclear ß-catenin for their activation. On the other hand, LPS induces actin reorganization, increased paracellular permeability, and endothelial cell detachment from the underlying extracellular matrix. Components of cell-cell (γ- and ß-catenin) and cell-matrix adherens junctions are cleaved by caspases activated during apoptosis. Cleavage of focal adhesion kinase leads to its dissociation from the focal adhesion-associated signaling protein, paxillin, resulting in reduced paxillin tyrosine phosphorylation. Therefore, endotoxin-induced disruption of endothelial monolayer integrity and survival signaling events is mediated, in part, through caspase cleavage of adherens junction proteins. ( See Omim for more ... )
SNP Discovery Data
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Refseq (FASTA)
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Dynamic
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Flanking Sequences
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Annotated Refseq (FASTA)
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Phase Output
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Phase2 Output
   
Linkage Disequlibrium
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African American
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European American
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Hispanic American
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Asthmatic
Association Study Data
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