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Innate Immunity PGA, Gene CARD11, Genotype Counts (0% SNPs)

SNP	Offset	Genotype	Cases	Controls	Combined	Cases HW P*	Controls HW P*	All HW P*
102615	1550	C:C	36	39	75	0.4400	0.5870	0.3142
102615	1550	C:G	210	212	422	0.4400	0.5870	0.3142
102615	1550	G:G	252	249	501	0.4400	0.5870	0.3142
102723	1658	A:A	2	2	4	0.7573	0.6666	1.0000
102723	1658	A:G	74	52	126	0.7573	0.6666	1.0000
102723	1658	G:G	428	434	862	0.7573	0.6666	1.0000
110740	9675	A:A	335	333	668	0.0697	1.0000	0.1760
110740	9675	A:G	135	155	290	0.0697	1.0000	0.1760
110740	9675	G:G	23	18	41	0.0697	1.0000	0.1760
113978	12913	G:G	301	330	631	0.1776	0.4641	0.1358
113978	12913	G:T	152	147	299	0.1776	0.4641	0.1358
113978	12913	T:T	27	20	47	0.1776	0.4641	0.1358
114060	12995	A:A	340	0	340	n/a	n/a	n/a
119383	18322	A:A	92	76	168	0.0511	0.5083	0.3530
119383	18322	A:G	220	237	457	0.0511	0.5083	0.3530
119383	18322	G:G	191	162	353	0.0511	0.5083	0.3530
122134	21073	C:C	433	431	864	1.0000	0.7185	0.4238
122134	21073	C:T	57	66	123	1.0000	0.7185	0.4238
122134	21073	T:T	1	1	2	1.0000	0.7185	0.4238
137247	36163	C:C	224	0	224	<0.0001	n/a	0.0000
137247	36163	C:T	66	0	66	<0.0001	n/a	0.0000
137247	36163	T:T	60	0	60	<0.0001	n/a	0.0000
142293	41209	C:C	475	467	942	1.0000	0.2528	0.6558
142293	41209	C:T	33	41	74	1.0000	0.2528	0.6558
142293	41209	T:T	0	2	2	1.0000	0.2528	0.6558
143149	42065	A:A	33	34	67	0.0218	0.0173	0.0009
143149	42065	A:C	134	136	270	0.0218	0.0173	0.0009
143149	42065	C:C	248	247	495	0.0218	0.0173	0.0009

Note: Numbers shown in the SNP column give the location of each SNP in the
reference sequence for this gene, where the first base of the reference
sequence is counted as 1. Numbers in the Offset column give the location
of the SNP relative to the gene start transcription site,
as calculated by SNPper (http://bio.chip.org:8080/bio/)

*HWE P = Hardy-Weinberg equilibrium P values.
These are calculated using an exact method as suggested in
Haldane, JBS. 1954. "An exact test for randomness of mating",
Journal of Genetics 52:631-635.

Innate Immunity in Heart, Lung and Blood Disease

Programs for Genomic Applications