bactericidal/permeability-increasing protein

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SNP Output table 17/01/2003 15:53:51 by Zope (pbsummary.py)

Innate Immunity PGA, Gene BPI, Allele Frequencies.

SNP	Offset	Allele1	Controls	Cases	Average	Allele2	Controls	Cases	Average	Controls Hz	Cases Hz	Average Hz
2491	-63	C	0.518	0.524	0.521	G	0.482	0.476	0.479	0.499	0.499	0.499
2616	62	C	0.528	0.544	0.535	G	0.472	0.456	0.465	0.498	0.496	0.497
2738	184	C	0.825	0.814	0.820	G	0.175	0.186	0.180	0.289	0.303	0.296
6272	3659	C	0.924	0.947	0.935	T	0.076	0.053	0.065	0.141	0.100	0.122
17016	14234	G	0.493	0.534	0.512	A	0.507	0.466	0.488	0.500	0.498	0.500
23356	20483	C	0.637	0.652	0.644	T	0.363	0.348	0.356	0.462	0.454	0.459
29660	26704	G	0.527	0.543	0.534	A	0.473	0.457	0.466	0.499	0.496	0.498
36045	33003	G	0.626	0.602	0.615	A	0.374	0.398	0.385	0.468	0.479	0.474

Note: Numbers shown in the SNP column give the location of each SNP in the
reference sequence for this gene, where the first base of the reference
sequence is counted as 1. Numbers in the Offset column give the location
of the SNP relative to the gene start transcription site,
as calculated by SNPper (http://bio.chip.org:8080/bio/)
Hz = heterozygosity

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Innate Immunity PGA

Innate Immunity in Heart, Lung and Blood Disease

Programs for Genomic Applications

Innate Immunity PGA, Gene BPI, Allele Frequencies.